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Bra007524 protein (Brassica rapa) - STRING interaction network
"Bra007524" - AT3G60330 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007524AT3G60330 (E=0.0) AHA7 | AHA7 (Arabidopsis H(+)-ATPase 7); hydrogen-exporting ATPase, phosphorylative mechanism (961 aa)    
Predicted Functional Partners:
Bra039808
AT3G53620 (E=2e-116) AtPPa4 | AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase (217 aa)
   
 
  0.879
Bra007016
AT3G53620 (E=5e-116) AtPPa4 | AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase (217 aa)
   
 
  0.879
Bra035179
AT1G15690 (E=0.0) AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase (769 aa)
   
 
  0.878
Bra026115
AT1G15690 (E=0.0) AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase (771 aa)
   
 
  0.878
Bra016653
AT1G15690 (E=0.0) AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase (769 aa)
   
 
  0.878
Bra009396
AT5G09650 (E=9e-149) AtPPa6 | AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase (298 aa)
   
 
  0.846
Bra006029
AT5G09650 (E=4e-161) AtPPa6 | AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase (296 aa)
   
 
  0.846
Bra040479
AT2G46860 (E=3e-113) AtPPa3 | AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3); inorganic diphosphatase/ pyrophosphatase (216 aa)
   
 
  0.841
Bra037416
AT1G01050 (E=2e-113) AtPPa1 | AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase (214 aa)
   
 
  0.841
Bra033292
AT1G01050 (E=5e-120) AtPPa1 | AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase (212 aa)
   
 
  0.841
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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