STRINGSTRING
Bra007556.1-P protein (Brassica rapa) - STRING interaction network
"Bra007556.1-P" - AT4G00100 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007556.1-PAT4G00100 (E=4e-081) ATRPS13A, RPS13, PFL2 | ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent of ribosome (151 aa)    
Predicted Functional Partners:
Bra040980
ATCG00780 (E=1e-038) RPL14 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex (171 aa)
   
  0.999
Bra003512
AT2G47610 (E=2e-108) | 60S ribosomal protein L7A (RPL7aA) (405 aa)
   
  0.999
Bra004654
AT2G41840 (E=3e-118) | 40S ribosomal protein S2 (RPS2C) (285 aa)
 
  0.999
Bra016913
AT1G58380 (E=1e-119) XW6 | XW6; structural constituent of ribosome (285 aa)
 
  0.999
Bra035439
AT1G58380 (E=7e-124) XW6 | XW6; structural constituent of ribosome (280 aa)
 
  0.999
Bra000242
AT1G58380 (E=6e-121) XW6 | XW6; structural constituent of ribosome (282 aa)
 
  0.999
Bra020605
AT5G28020 (E=3e-148) CYSD2, ATCYSD2 | CYSD2 (CYSTEINE SYNTHASE D2); catalytic/ cysteine synthase/ pyridoxal phosphate binding (434 aa)
   
  0.999
Bra001131
AT3G04940 (E=3e-140) ATCYSD1, CYSD1 | CYSD1 (CYSTEINE SYNTHASE D1); cysteine synthase (400 aa)
   
  0.999
Bra040409
AT4G34670 (E=2e-120) | 40S ribosomal protein S3A (RPS3aB) (262 aa)
   
  0.999
Bra040119
AT4G34670 (E=9e-126) | 40S ribosomal protein S3A (RPS3aB) (261 aa)
   
  0.999
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (7%) [HD]