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Bra007643 protein (Brassica rapa) - STRING interaction network
"Bra007643" - AT3G61940 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra007643AT3G61940 (E=3e-026) MTPA1, ATMTPA1 | MTPA1; efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (102 aa)    
Predicted Functional Partners:
Bra030434
AT1G51610 (E=6e-204) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (453 aa)
         
  0.491
Bra018918
AT1G51610 (E=3e-203) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (457 aa)
         
  0.491
Bra017167
AT1G51610 (E=2e-028) | cation efflux family protein / metal tolerance protein, putative (MTPc4) (101 aa)
         
  0.491
Bra034779
AT3G12100 (E=1e-198) | cation efflux family protein / metal tolerance protein, putative (390 aa)
           
  0.485
Bra025618
AT2G04620 (E=3e-223) | cation efflux family protein (765 aa)
           
  0.485
Bra021036
AT2G32270 (E=4e-030) ZIP3 | ZIP3; zinc ion transmembrane transporter (474 aa)
     
   
  0.456
Bra004281
AT1G68100 (E=1e-114) IAR1 | IAR1 (IAA-ALANINE RESISTANT 1); metal ion transmembrane transporter (426 aa)
     
 
  0.454
Bra004051
AT1G68100 (E=1e-162) IAR1 | IAR1 (IAA-ALANINE RESISTANT 1); metal ion transmembrane transporter (458 aa)
     
 
  0.454
Bra027641
AT1G63440 (E=0.0) HMA5 | HMA5 (HEAVY METAL ATPASE 5); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism (1192 aa)
   
   
  0.446
Bra038417
AT1G31260 (E=5e-081) ZIP10 | ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter (215 aa)
     
   
  0.445
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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