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Bra007652 protein (Brassica rapa) - STRING interaction network
"Bra007652" - AT3G62020 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007652AT3G62020 (E=6e-117) GLP10 | GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir (220 aa)    
Predicted Functional Partners:
Bra024320
AT5G64670 (E=3e-125) | ribosomal protein L15 family protein (281 aa)
           
  0.471
Bra039642
AT1G50310 (E=8e-256) ATSTP9, STP9 | STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar-hydrogen symporter (516 aa)
           
  0.467
Bra038245
AT3G19940 (E=1e-235) | sugar transporter, putative (511 aa)
           
  0.467
Bra038243
AT3G19940 (E=2e-236) | sugar transporter, putative (511 aa)
           
  0.467
Bra031762
AT1G11260 (E=3e-283) STP1, ATSTP1 | STP1 (SUGAR TRANSPORTER 1); carbohydrate transmembrane transporter/ sugar-hydrogen symporter (521 aa)
           
  0.467
Bra019870
AT1G11260 (E=1e-291) STP1, ATSTP1 | STP1 (SUGAR TRANSPORTER 1); carbohydrate transmembrane transporter/ sugar-hydrogen symporter (522 aa)
           
  0.467
Bra018841
AT1G50310 (E=2e-257) ATSTP9, STP9 | STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar-hydrogen symporter (516 aa)
           
  0.467
Bra033549
AT4G16260 (E=2e-176) | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (357 aa)
           
  0.454
Bra003273
AT3G57240 (E=1e-138) BG3 | BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds (339 aa)
           
  0.454
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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