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Bra007687 protein (Brassica rapa) - STRING interaction network
"Bra007687" - AT3G62600 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007687AT3G62600 (E=2e-172) ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding (346 aa)    
Predicted Functional Partners:
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
 
  0.972
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
 
  0.972
Bra004709
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding (657 aa)
   
  0.970
Bra031657
AT1G09080 (E=0.0) BIP3 | BIP3; ATP binding (673 aa)
 
  0.957
Bra022819
AT5G42020 (E=0.0) BIP, BIP2 | BIP2; ATP binding (669 aa)
 
  0.946
Bra015047
AT5G42020 (E=0.0) BIP, BIP2 | BIP2; ATP binding (666 aa)
 
  0.942
Bra028521
AT5G42020 (E=0.0) BIP, BIP2 | BIP2; ATP binding (665 aa)
 
  0.942
Bra023110
AT5G42020 (E=4e-289) BIP, BIP2 | BIP2; ATP binding (642 aa)
 
  0.933
Bra028626
AT5G09590 (E=5e-025) MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding (156 aa)
 
  0.933
Bra026084
AT1G16030 (E=0.0) Hsp70b | Hsp70b (heat shock protein 70B); ATP binding (647 aa)
 
  0.932
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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