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Bra007730 protein (Brassica rapa) - STRING interaction network
"Bra007730" - AT3G63130 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007730AT3G63130 (E=1e-219) RANGAP1 | RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator/ protein binding (535 aa)    
Predicted Functional Partners:
Bra001616
AT3G15980 (E=1e-093) | coatomer protein complex, subunit beta 2 (beta prime), putative (728 aa)
     
  0.977
Bra031555
AT1G07140 (E=2e-078) SIRANBP | SIRANBP; Ran GTPase binding (228 aa)
     
  0.975
Bra030675
AT1G07140 (E=8e-082) SIRANBP | SIRANBP; Ran GTPase binding (224 aa)
     
  0.975
Bra030387
AT1G52380 (E=1e-141) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (428 aa)
     
  0.975
Bra022775
AT2G30060 (E=1e-079) | Ran-binding protein 1b (RanBP1b) (221 aa)
     
  0.975
Bra018968
AT1G52380 (E=1e-036) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (89 aa)
     
  0.975
Bra018966
AT1G52380 (E=7e-110) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (397 aa)
     
  0.975
Bra015554
AT1G07140 (E=1e-072) SIRANBP | SIRANBP; Ran GTPase binding (220 aa)
     
  0.975
Bra014602
AT3G57870 (E=6e-092) AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase (160 aa)
     
  0.968
Bra014406
AT3G57870 (E=6e-081) AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase (160 aa)
     
  0.968
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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