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Bra007768 protein (Brassica rapa) - STRING interaction network
"Bra007768" - AT2G26140 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra007768AT2G26140 (E=1e-229) ftsh4 | ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase (496 aa)    
Predicted Functional Partners:
Bra041120
ATCG00120 (E=1e-229) ATPA | Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. ; Produces ATP from ADP in the presence of a proton gradient across the membrane (504 aa)
     
 
  0.921
Bra040490
AT2G07698 (E=1e-039) | ATP synthase alpha chain, mitochondrial, putative (99 aa)
     
 
  0.921
Bra026894
AT3G02450 (E=2e-044) | cell division protein ftsH, putative (113 aa)
     
 
  0.774
Bra007382
AT3G58140 (E=2e-226) | phenylalanyl-tRNA synthetase class IIc family protein (430 aa)
   
 
  0.769
Bra003322
AT3G58140 (E=4e-232) | phenylalanyl-tRNA synthetase class IIc family protein (426 aa)
   
 
  0.769
Bra011157
AT4G30000 (E=6e-256) | dihydropterin pyrophosphokinase, putative / dihydropteroate synthase, putative / DHPS, putative (525 aa)
   
   
  0.723
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
   
 
  0.721
Bra024550
AT1G22940 (E=3e-253) TH1, TH-1, THIE | TH1 (THIAMINE REQUIRING 1); hydroxymethylpyrimidine kinase/ phosphomethylpyrimidine kinase/ thiamin-phosphate diphosphorylase (526 aa)
         
  0.706
Bra024312
AT5G64580 (E=0.0) | AAA-type ATPase family protein (854 aa)
   
 
0.661
Bra003604
AT1G79560 (E=0.0) EMB1047, FTSH12 | FTSH12 (FTSH PROTEASE 12); ATP-dependent peptidase/ ATPase/ metallopeptidase (1011 aa)
   
 
0.650
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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