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Bra007769 protein (Brassica rapa) - STRING interaction network
"Bra007769" - AT2G26070 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007769AT2G26070 (E=2e-115) RTE1 | RTE1 (REVERSION-TO-ETHYLENE SENSITIVITY1) (250 aa)    
Predicted Functional Partners:
Bra004160
AT1G66340 (E=0.0) ETR1, EIN1, ETR | ETR1 (ETHYLENE RESPONSE 1); ethylene binding / protein histidine kinase/ two-component response regulator (736 aa)
       
 
  0.945
Bra004449
AT2G40940 (E=0.0) ERS1, ERS | ERS1 (ETHYLENE RESPONSE SENSOR 1); ethylene binding / protein histidine kinase/ receptor (611 aa)
       
 
  0.814
Bra021809
AT2G32720 (E=6e-062) B5 #4, ATCB5-B, CB5-B | CB5-B (CYTOCHROME B5 ISOFORM B); heme binding (134 aa)
     
 
  0.624
Bra022898
AT2G32720 (E=5e-059) B5 #4, ATCB5-B, CB5-B | CB5-B (CYTOCHROME B5 ISOFORM B); heme binding (134 aa)
     
 
  0.618
Bra005564
AT2G32720 (E=7e-062) B5 #4, ATCB5-B, CB5-B | CB5-B (CYTOCHROME B5 ISOFORM B); heme binding (134 aa)
     
 
  0.618
Bra024721
AT1G26340 (E=2e-058) B5 #6, ATCB5-A, CB5-A | CB5-A (CYTOCHROME B5 ISOFORM A); heme binding (135 aa)
     
      0.615
Bra022660
AT5G53560 (E=2e-069) ATB5-A, B5 #2, ATCB5-E, CB5-E | CB5-E (CYTOCHROME B5 ISOFORM E); heme binding (134 aa)
     
      0.614
Bra037461
AT5G48810 (E=3e-054) ATB5-B, B5 #3, ATCB5-D, CB5-D | CB5-D (CYTOCHROME B5 ISOFORM D); heme binding (138 aa)
     
 
  0.613
Bra036160
AT5G48810 (E=4e-054) ATB5-B, B5 #3, ATCB5-D, CB5-D | CB5-D (CYTOCHROME B5 ISOFORM D); heme binding (140 aa)
     
 
  0.613
Bra015303
AT1G04310 (E=2e-258) ERS2 | ERS2 (ETHYLENE RESPONSE SENSOR 2); ethylene binding / glycogen synthase kinase 3/ protein histidine kinase/ receptor (616 aa)
       
 
  0.573
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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