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Bra007793 protein (Brassica rapa) - STRING interaction network
"Bra007793" - AT4G32400 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007793AT4G32400 (E=5e-159) SHS1, ATBT1 | SHS1 (SODIUM HYPERSENSITIVE 1); binding / nucleotide transmembrane transporter/ transporter (398 aa)    
Predicted Functional Partners:
Bra035190
AT1G80300 (E=6e-306) NTT1, ATNTT1 | NTT1 (NUCLEOTIDE TRANSPORTER 1); ATP-ADP antiporter (614 aa)
           
  0.506
Bra026126
AT1G15500 (E=1e-313) ATNTT2 | ATNTT2; ATP-ADP antiporter (609 aa)
           
  0.506
Bra003560
AT1G80300 (E=0.0) NTT1, ATNTT1 | NTT1 (NUCLEOTIDE TRANSPORTER 1); ATP-ADP antiporter (616 aa)
           
  0.506
Bra016656
AT1G80300 (E=2e-288) NTT1, ATNTT1 | NTT1 (NUCLEOTIDE TRANSPORTER 1); ATP-ADP antiporter (610 aa)
           
  0.473
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
           
  0.447
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
           
  0.447
Bra002259
AT5G19760 (E=2e-085) | dicarboxylate/tricarboxylate carrier (DTC) (259 aa)
     
   
  0.435
Bra039633
AT5G56450 (E=1e-022) | mitochondrial substrate carrier family protein (155 aa)
         
  0.432
Bra039632
AT5G56450 (E=1e-022) | mitochondrial substrate carrier family protein (179 aa)
         
  0.432
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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