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Bra007794 protein (Brassica rapa) - STRING interaction network
"Bra007794" - AT2G25530 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra007794AT2G25530 (E=9e-288) | AFG1-like ATPase family protein (584 aa)    
Predicted Functional Partners:
Bra031877
AT5G65165 (E=6e-164) SDH2-3 | SDH2-3; electron carrier/ succinate dehydrogenase ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (306 aa)
 
          0.553
Bra025272
AT5G40650 (E=1e-146) SDH2-2 | SDH2-2; electron carrier/ succinate dehydrogenase ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (281 aa)
 
          0.552
Bra033006
AT3G27380 (E=3e-147) SDH2-1 | SDH2-1; electron carrier/ succinate dehydrogenase ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (281 aa)
 
          0.551
Bra028469
AT5G40650 (E=3e-115) SDH2-2 | SDH2-2; electron carrier/ succinate dehydrogenase ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (201 aa)
 
          0.549
Bra039082
AT3G27380 (E=1e-113) SDH2-1 | SDH2-1; electron carrier/ succinate dehydrogenase ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (225 aa)
 
          0.539
Bra036142
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (729 aa)
              0.536
Bra020639
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (608 aa)
              0.536
Bra015052
AT3G24530 (E=2e-260) | AAA-type ATPase family protein / ankyrin repeat family protein (482 aa)
       
 
  0.490
Bra034089
AT3G09840 (E=0.0) CDC48, ATCDC48, CDC48A | CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding (810 aa)
           
  0.483
Bra029941
AT4G04180 (E=7e-029) | AAA-type ATPase family protein (205 aa)
           
  0.483
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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