STRINGSTRING
Bra007869 protein (Brassica rapa) - STRING interaction network
"Bra007869" - AT1G69600 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007869AT1G69600 (E=4e-088) ZFHD1, ATHB29 | ZFHD1 (ZINC FINGER HOMEODOMAIN 1); DNA binding / transcription activator/ transcription factor (230 aa)    
Predicted Functional Partners:
Bra026812
AT1G14687 (E=2e-072) AtHB32 | AtHB32 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 32); DNA binding / transcription factor (172 aa)
       
 
0.633
Bra033570
AT4G38580 (E=3e-084) ATFP6, HIPP26 | ATFP6 (FARNESYLATED PROTEIN 6); metal ion binding (153 aa)
       
 
  0.618
Bra010738
AT4G38580 (E=9e-084) ATFP6, HIPP26 | ATFP6 (FARNESYLATED PROTEIN 6); metal ion binding (153 aa)
       
 
  0.618
Bra037919
AT4G10465 (E=2e-081) | metal ion binding (182 aa)
       
      0.612
Bra037865
AT4G08570 (E=7e-060) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (150 aa)
       
      0.612
Bra028528
AT2G18196 (E=1e-096) | metal ion binding (178 aa)
       
      0.612
Bra023619
AT5G17450 (E=5e-081) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (149 aa)
       
      0.612
Bra016162
AT1G71050 (E=4e-056) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (150 aa)
       
      0.612
Bra013976
AT5G17450 (E=3e-082) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (149 aa)
       
      0.612
Bra011840
AT4G39700 (E=2e-084) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (158 aa)
       
      0.612
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (11%) [HD]