STRINGSTRING
Bra007884 protein (Brassica rapa) - STRING interaction network
"Bra007884" - AT1G69810 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007884AT1G69810 (E=5e-111) WRKY36, ATWRKY36 | WRKY36; transcription factor (383 aa)    
Predicted Functional Partners:
Bra032181
AT5G06520 (E=4e-017) | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (216 aa)
           
  0.503
Bra039158
AT3G02150 (E=2e-101) PTF1, TFPD | PTF1 (PLASTID TRANSCRIPTION FACTOR 1); transcription factor (309 aa)
       
      0.489
Bra036288
AT4G02190 (E=1e-239) | DC1 domain-containing protein (1673 aa)
       
      0.489
Bra018126
AT3G47620 (E=2e-126) AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor (466 aa)
       
      0.489
Bra015980
AT1G73620 (E=3e-130) | thaumatin-like protein, putative / pathogenesis-related protein, putative (245 aa)
           
  0.453
Bra032258
AT1G48620 (E=2e-042) HON5 | HON5 (High Mobility Group Family A 5); DNA binding (603 aa)
           
  0.418
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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