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Bra007911 protein (Brassica rapa) - STRING interaction network
"Bra007911" - AT1G70330 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007911AT1G70330 (E=5e-203) ENT1,AT, ATENT1 | ENT1,AT (EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1); nucleoside transmembrane transporter/ nucleoside transmembrane transporter, against a concentration gradient (422 aa)    
Predicted Functional Partners:
Bra006934
AT3G52570 (E=2e-081) | ATP binding (498 aa)
     
 
  0.518
Bra021719
AT2G31710 (E=2e-046) | unknown protein ; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum (105 aa)
           
  0.505
Bra012248
AT1G20770 (E=6e-077) | unknown protein (219 aa)
           
  0.505
Bra038340
AT1G68890 (E=0.0) | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding (1710 aa)
       
      0.499
Bra033201
AT4G10030 (E=6e-093) | hydrolase, alpha/beta fold family protein (187 aa)
       
      0.499
Bra033200
AT4G10030 (E=9e-077) | hydrolase, alpha/beta fold family protein (212 aa)
       
      0.499
Bra000698
AT4G10030 (E=9e-179) | hydrolase, alpha/beta fold family protein (384 aa)
       
      0.499
Bra007034
AT3G53900 (E=3e-141) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative (291 aa)
           
  0.439
Bra032261
AT1G48630 (E=1e-178) RACK1B_AT | RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding (327 aa)
     
        0.426
Bra031014
AT1G18080 (E=1e-186) ATARCA, RACK1A_AT | ATARCA; nucleotide binding (327 aa)
     
        0.426
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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