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Bra007923 protein (Brassica rapa) - STRING interaction network
"Bra007923" - AT1G70550 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007923AT1G70550 (E=2e-215) | unknown protein (410 aa)    
Predicted Functional Partners:
Bra034321
AT2G27080 (E=8e-119) | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (260 aa)
           
  0.403
Bra024006
AT4G31470 (E=2e-070) | pathogenesis-related protein, putative (181 aa)
           
  0.403
Bra020363
AT5G58530 (E=7e-098) | glutaredoxin family protein (252 aa)
           
  0.400
Bra005673
AT5G01650 (E=2e-050) | macrophage migration inhibitory factor family protein / MIF family protein (114 aa)
           
  0.400
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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