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Bra007949 protein (Brassica rapa) - STRING interaction network
"Bra007949" - AT1G70850 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007949AT1G70850 (E=1e-073) MLP34 | MLP34 (MLP-LIKE PROTEIN 34) (252 aa)    
Predicted Functional Partners:
Bra033658
AT5G43080 (E=6e-153) CYCA3;1 | CYCA3;1 (Cyclin A3;1); cyclin-dependent protein kinase regulator (356 aa)
       
      0.906
Bra040793
AT1G47210 (E=4e-170) CYCA3;2 | cyclin family protein (363 aa)
       
      0.614
Bra040792
AT1G47230 (E=6e-159) CYCA3;4 | cyclin, putative (364 aa)
       
      0.614
Bra040753
AT1G47210 (E=1e-171) CYCA3;2 | cyclin family protein (363 aa)
       
      0.614
Bra040710
AT1G47230 (E=2e-161) CYCA3;4 | cyclin, putative (371 aa)
       
      0.614
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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