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Bra007974 protein (Brassica rapa) - STRING interaction network
"Bra007974" - AT1G71520 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007974AT1G71520 (E=3e-056) | AP2 domain-containing transcription factor, putative (148 aa)    
Predicted Functional Partners:
Bra038379
AT1G65280 (E=5e-196) | heat shock protein binding (572 aa)
           
  0.476
Bra019169
AT4G25380 (E=3e-052) | zinc finger (AN1-like) family protein (131 aa)
           
  0.476
Bra040001
AT1G33110 (E=1e-262) | MATE efflux family protein (493 aa)
           
  0.473
Bra035477
AT1G33110 (E=2e-249) | MATE efflux family protein (494 aa)
           
  0.441
Bra019314
AT4G23290 (E=1e-244) | protein kinase family protein (684 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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