STRINGSTRING
Bra008041 protein (Brassica rapa) - STRING interaction network
"Bra008041" - AT1G72630 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008041AT1G72630 (E=1e-056) ELF4-L2 | ELF4-L2 (ELF4-Like 2) (115 aa)    
Predicted Functional Partners:
Bra036426
AT3G03940 (E=0.0) | protein kinase family protein (704 aa)
       
 
  0.421
Bra027409
AT3G13670 (E=0.0) | protein kinase family protein (689 aa)
       
 
  0.421
Bra002140
AT5G18190 (E=0.0) | protein kinase family protein (691 aa)
       
 
  0.421
Bra021498
AT3G13670 (E=0.0) | protein kinase family protein (683 aa)
       
 
  0.417
Bra007778
AT2G25760 (E=0.0) | protein kinase family protein (600 aa)
       
 
  0.417
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (21%) [HD]