STRINGSTRING
Bra008046 protein (Brassica rapa) - STRING interaction network
"Bra008046" - AT1G72750 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008046AT1G72750 (E=3e-072) ATTIM23-2 | ATTIM23-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (188 aa)    
Predicted Functional Partners:
Bra030980
AT1G20350 (E=3e-053) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (217 aa)
     
  0.975
Bra005199
AT1G20350 (E=2e-048) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (225 aa)
     
  0.975
Bra028975
AT4G26670 (E=5e-053) | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (235 aa)
     
  0.971
Bra026412
AT4G26670 (E=1e-081) | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (210 aa)
     
  0.971
Bra016469
AT1G20350 (E=3e-052) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (203 aa)
     
  0.971
Bra016468
AT1G20350 (E=1e-054) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (217 aa)
     
  0.971
Bra016467
AT1G20350 (E=2e-055) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (217 aa)
     
  0.971
Bra006109
AT2G37410 (E=6e-042) ATTIM17-2, TIM17 | ATTIM17-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (130 aa)
     
  0.971
Bra002900
AT5G55510 (E=5e-081) | P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (213 aa)
     
  0.971
Bra036674
AT2G36070 (E=1e-099) ATTIM44-2 | ATTIM44-2; protein-transmembrane transporting ATPase (413 aa)
     
  0.970
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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