STRINGSTRING
Bra008099 protein (Brassica rapa) - STRING interaction network
"Bra008099" - AT1G73500 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008099AT1G73500 (E=2e-131) ATMKK9, MKK9 | MKK9 (MAP KINASE KINASE 9); MAP kinase kinase/ kinase/ protein kinase activator (306 aa)    
Predicted Functional Partners:
Bra040822
AT2G20050 (E=0.0) | ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphatase (966 aa)
       
  0.970
Bra000647
AT4G08500 (E=2e-146) MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MEKK1 (MAP KINASE KINASE KINASE 1); DNA binding / MAP kinase kinase kinase/ kinase/ kinase binding / protein binding (541 aa)
   
 
0.962
Bra037860
AT4G08500 (E=3e-210) MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MEKK1 (MAP KINASE KINASE KINASE 1); DNA binding / MAP kinase kinase kinase/ kinase/ kinase binding / protein binding (599 aa)
       
0.958
Bra016108
AT1G71860 (E=3e-142) PTP1, ATPTP1 | PTP1 (PROTEIN TYROSINE PHOSPHATASE 1); protein tyrosine phosphatase (343 aa)
       
  0.937
Bra000209
AT2G40860 (E=0.0) | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (655 aa)
       
0.906
Bra036394
AT4G01370 (E=8e-034) ATMPK4, MPK4 | ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase (116 aa)
     
  0.904
Bra029283
AT5G19010 (E=4e-029) MPK16 | MPK16; MAP kinase (141 aa)
     
  0.904
Bra017970
AT5G19010 (E=3e-028) MPK16 | MPK16; MAP kinase (156 aa)
     
  0.904
Bra016567
AT1G18150 (E=5e-042) ATMPK8 | ATMPK8; MAP kinase (135 aa)
     
  0.904
Bra002452
AT1G18150 (E=3e-016) ATMPK8 | ATMPK8; MAP kinase (96 aa)
     
  0.904
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (9%) [HD]