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Bra008105 protein (Brassica rapa) - STRING interaction network
"Bra008105" - AT1G73590 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra008105AT1G73590 (E=0.0) PIN1, ATPIN1 | PIN1 (PIN-FORMED 1); transporter ; May act as a component of the auxin efflux carrier (616 aa)    
Predicted Functional Partners:
Bra021925
AT2G34650 (E=7e-213) PID, ABR | PID (PINOID); kinase/ protein kinase/ protein serine/threonine kinase (439 aa)
     
 
  0.846
Bra005403
AT2G34650 (E=6e-214) PID, ABR | PID (PINOID); kinase/ protein kinase/ protein serine/threonine kinase (439 aa)
     
 
  0.846
Bra023087
AT2G36910 (E=0.0) ATPGP1, PGP1, ABCB1 | ABCB1 (ATP BINDING CASSETTE SUBFAMILY B1); ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter/ calmodulin binding (1339 aa)
       
 
  0.696
Bra039042
AT3G28860 (E=0.0) ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ABCB19; ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter (1252 aa)
       
 
  0.682
Bra025359
AT3G28860 (E=0.0) ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ABCB19; ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter (1252 aa)
       
 
  0.682
Bra002868
AT5G55910 (E=2e-236) D6PK | D6PK (D6 PROTEIN KINASE); kinase/ protein kinase (500 aa)
       
 
  0.642
Bra028525
AT5G42080 (E=0.0) ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding (610 aa)
       
      0.625
ARF5-1
AT1G19850 (E=0.0) MP, ARF5, IAA24 | MP (MONOPTEROS); transcription factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (867 aa)
     
   
  0.591
Bra005136
AT2G38120 (E=5e-267) AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter (493 aa)
           
  0.544
Bra000039
AT2G38120 (E=4e-265) AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter (532 aa)
           
  0.544
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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