STRINGSTRING
Bra008145 protein (Brassica rapa) - STRING interaction network
"Bra008145" - AT1G74340 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008145AT1G74340 (E=3e-033) | dolichol phosphate-mannose biosynthesis regulatory protein-related (80 aa)    
Predicted Functional Partners:
Bra012235
AT1G20575 (E=6e-134) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (247 aa)
     
  0.948
Bra005376
AT2G34980 (E=4e-112) SETH1 | SETH1; phosphatidylinositol N-acetylglucosaminyltransferase/ transferase (312 aa)
       
  0.942
Bra020174
AT5G22130 (E=1e-218) PNT1 | PNT1 (PEANUT 1); alpha-1,4-mannosyltransferase/ mannosyltransferase/ transferase, transferring glycosyl groups (437 aa)
         
  0.937
Bra009589
AT3G45100 (E=2e-218) SETH2 | SETH2; transferase, transferring glycosyl groups (429 aa)
       
  0.936
Bra003321
AT3G58130 (E=3e-125) | N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related (256 aa)
         
  0.933
Bra014103
AT1G48140 (E=5e-045) | dolichol-phosphate mannosyltransferase-related (89 aa)
     
 
  0.932
Bra007308
AT3G57170 (E=1e-217) | N-acetylglucosaminyl transferase component family protein / Gpi1 family protein (685 aa)
         
  0.931
Bra017719
AT4G35530 (E=3e-085) | phosphatidylinositolglycan-related (194 aa)
         
  0.927
Bra011621
AT4G35530 (E=1e-084) | phosphatidylinositolglycan-related (194 aa)
         
  0.927
Bra014644
AT3G57220 (E=7e-188) | UDP-GlcNAc-dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative (419 aa)
     
 
  0.911
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (8%) [HD]