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Bra008148 protein (Brassica rapa) - STRING interaction network
"Bra008148" - AT4G33760 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra008148AT4G33760 (E=6e-012) | tRNA synthetase class II (D, K and N) family protein (236 aa)    
Predicted Functional Partners:
Bra015031
AT1G48520 (E=1e-032) GATB | GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase (108 aa)
   
  0.833
Bra001942
AT1G48520 (E=2e-241) GATB | GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase (531 aa)
   
  0.833
Bra011081
AT4G29060 (E=1e-177) emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1770 aa)
   
  0.823
Bra009383
AT5G09420 (E=2e-282) ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen ligase, with glutamine as amido-N-donor (923 aa)
   
  0.809
Bra003767
AT3G48110 (E=2e-278) EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase (1044 aa)
   
   
  0.796
Bra007382
AT3G58140 (E=2e-226) | phenylalanyl-tRNA synthetase class IIc family protein (430 aa)
     
 
  0.779
Bra003322
AT3G58140 (E=4e-232) | phenylalanyl-tRNA synthetase class IIc family protein (426 aa)
     
 
  0.779
Bra031917
AT5G64440 (E=7e-285) AtFAAH | AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase); N-(long-chain-acyl)ethanolamine deacylase/ amidase (613 aa)
   
  0.777
Bra031652
AT1G08980 (E=3e-182) ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase (421 aa)
   
  0.777
Bra026512
AT3G25660 (E=4e-014) | glutamyl-tRNA(Gln) amidotransferase, putative (181 aa)
   
  0.777
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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