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Bra008173 protein (Brassica rapa) - STRING interaction network
"Bra008173" - AT1G74960 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008173AT1G74960 (E=1e-111) FAB1, KAS2 | FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase (448 aa)    
Predicted Functional Partners:
Bra036771
AT1G36160 (E=0.0) ACC1, AT-ACC1, EMB22, GK, PAS3 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase (2233 aa)
   
  0.998
Bra018702
AT1G36180 (E=0.0) ACC2 | ACC2 (ACETYL-COA CARBOXYLASE 2); acetyl-CoA carboxylase (2310 aa)
   
  0.998
Bra018329
AT2G30200 (E=2e-162) | [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase (384 aa)
 
  0.994
Bra021619
AT2G30200 (E=4e-168) | [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase (367 aa)
 
  0.994
Bra022783
AT2G30200 (E=3e-052) | [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase (154 aa)
 
  0.994
Bra027031
AT1G62640 (E=7e-219) KAS III | KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III); 3-oxoacyl-[acyl-carrier-protein] synthase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups (404 aa)
 
 
  0.948
Bra036142
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (729 aa)
     
 
  0.903
Bra020639
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (608 aa)
     
 
  0.903
Bra040638
AT3G05020 (E=4e-053) ACP1, ACP | ACP1 (acyl carrier protein 1); acyl carrier ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (134 aa)
   
  0.896
Bra039471
AT3G05020 (E=9e-042) ACP1, ACP | ACP1 (acyl carrier protein 1); acyl carrier ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (134 aa)
   
  0.896
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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