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Bra008188 protein (Brassica rapa) - STRING interaction network
"Bra008188" - AT1G75270 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008188AT1G75270 (E=5e-099) DHAR2 | DHAR2 (DEHYDROASCORBATE REDUCTASE 2); glutathione binding / glutathione dehydrogenase (ascorbate) (214 aa)    
Predicted Functional Partners:
Bra007087
AT3G54660 (E=1e-278) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (563 aa)
           
  0.582
Bra015679
AT1G77290 (E=4e-145) | tetrachloro-p-hydroquinone reductive dehalogenase-related (342 aa)
           
  0.574
Bra017686
AT4G35000 (E=5e-144) APX3 | APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase (287 aa)
           
  0.541
Bra038140
AT1G53680 (E=4e-111) ATGSTU28 | ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28); glutathione transferase (224 aa)
   
     
  0.519
Bra007130
AT3G55040 (E=5e-125) GSTL2 | GSTL2 (296 aa)
   
     
  0.506
Bra031598
AT1G07890 (E=2e-120) APX1, CS1 | APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase (253 aa)
           
  0.505
Bra025995
AT1G17170 (E=3e-105) ATGSTU24, GST | ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24); glutathione binding / glutathione transferase (215 aa)
   
   
  0.501
Bra003644
AT1G78380 (E=8e-103) ATGSTU19, GST8 | ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase (219 aa)
   
   
  0.491
Bra014801
AT3G54660 (E=5e-268) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (615 aa)
           
  0.483
Bra018100
AT3G47930 (E=2e-308) ATGLDH | ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE); L-gulono-1,4-lactone dehydrogenase/ galactonolactone dehydrogenase (601 aa)
           
  0.478
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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