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Bra008189 protein (Brassica rapa) - STRING interaction network
"Bra008189" - AT1G75330 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008189AT1G75330 (E=2e-034) OTC | OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ ornithine carbamoyltransferase (75 aa)    
Predicted Functional Partners:
Bra017844
AT4G37670 (E=4e-129) | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (569 aa)
   
 
  0.995
Bra011778
AT4G37670 (E=0.0) | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (614 aa)
   
 
  0.995
Bra032344
AT1G29900 (E=0.0) CARB | CARB (CARBAMOYL PHOSPHATE SYNTHETASE B); ATP binding / carbamoyl-phosphate synthase/ catalytic (1176 aa)
   
  0.988
Bra019206
AT4G24830 (E=2e-151) | arginosuccinate synthase family (517 aa)
   
 
  0.977
Bra013839
AT4G24830 (E=3e-248) | arginosuccinate synthase family (499 aa)
   
 
  0.977
Bra014618
AT3G57560 (E=7e-138) | aspartate/glutamate/uridylate kinase family protein (344 aa)
   
 
  0.966
Bra007337
AT3G57560 (E=7e-162) | aspartate/glutamate/uridylate kinase family protein (343 aa)
   
 
  0.966
Bra036771
AT1G36160 (E=0.0) ACC1, AT-ACC1, EMB22, GK, PAS3 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase (2233 aa)
   
 
  0.960
Bra018702
AT1G36180 (E=0.0) ACC2 | ACC2 (ACETYL-COA CARBOXYLASE 2); acetyl-CoA carboxylase (2310 aa)
   
 
  0.960
Bra027810
AT2G19940 (E=5e-195) | N-acetyl-gamma-glutamyl-phosphate reductase/ NAD or NADH binding / binding / catalytic/ oxidoreductase, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor / protein dimerization (393 aa)
   
   
  0.954
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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