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Bra008273 protein (Brassica rapa) - STRING interaction network
"Bra008273" - AT1G76750 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008273AT1G76750 (E=1e-063) | unknown protein (155 aa)    
Predicted Functional Partners:
Bra029067
AT5G53460 (E=0.0) GLT1 | GLT1; glutamate synthase (NADH) (2199 aa)
           
  0.491
Bra004638
AT2G41670 (E=9e-189) | GTP-binding family protein (377 aa)
           
  0.489
Bra033442
AT3G52300 (E=1e-089) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.479
Bra012809
AT3G52300 (E=5e-081) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.479
Bra006918
AT3G52300 (E=2e-080) ATPQ | ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter (168 aa)
           
  0.479
Bra022476
AT1G65450 (E=4e-135) | transferase family protein (451 aa)
           
  0.416
Bra016948
AT2G41220 (E=0.0) GLU2 | GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin) (1626 aa)
           
  0.412
Bra009483
AT5G04140 (E=0.0) GLU1, GLS1, GLUS, FD-GOGAT | GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) (1620 aa)
           
  0.412
Bra000220
AT2G41220 (E=0.0) GLU2 | GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin) (1586 aa)
           
  0.412
Bra004275
AT1G68010 (E=9e-208) HPR | HPR; glycerate dehydrogenase/ poly(U) binding (386 aa)
           
  0.408
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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