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Bra008277 protein (Brassica rapa) - STRING interaction network
"Bra008277" - AT1G76800 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008277AT1G76800 (E=5e-076) | nodulin, putative (194 aa)    
Predicted Functional Partners:
Bra029067
AT5G53460 (E=0.0) GLT1 | GLT1; glutamate synthase (NADH) (2199 aa)
   
   
  0.602
Bra026634
AT2G01770 (E=2e-110) VIT1 | VIT1 (vacuolar iron transporter 1); iron ion transmembrane transporter (250 aa)
   
     
  0.522
Bra024856
AT2G01770 (E=2e-108) VIT1 | VIT1 (vacuolar iron transporter 1); iron ion transmembrane transporter (250 aa)
   
          0.497
Bra040484
AT2G46790 (E=2e-152) APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator (824 aa)
   
 
  0.477
Bra039979
AT2G29410 (E=9e-146) MTPB1, ATMTPB1 | MTPB1 (METAL TOLERANCE PROTEIN B1); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (355 aa)
   
 
  0.427
Bra018390
AT2G29410 (E=9e-030) MTPB1, ATMTPB1 | MTPB1 (METAL TOLERANCE PROTEIN B1); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (113 aa)
   
 
  0.427
Bra007643
AT3G61940 (E=3e-026) MTPA1, ATMTPA1 | MTPA1; efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (102 aa)
   
 
  0.427
Bra004506
AT3G58810 (E=1e-129) MTPA2, ATMTPA2, MTP3, ATMTP3 | MTPA2 (METAL TOLERANCE PROTEIN A2); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (377 aa)
   
 
  0.427
Bra000432
AT3G58810 (E=1e-127) MTPA2, ATMTPA2, MTP3, ATMTP3 | MTPA2 (METAL TOLERANCE PROTEIN A2); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter (385 aa)
   
 
  0.427
Bra030669
AT1G07050 (E=2e-063) | CONSTANS-like protein-related (383 aa)
       
 
  0.407
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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