STRINGSTRING
Bra008321 protein (Brassica rapa) - STRING interaction network
"Bra008321" - AT1G77660 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008321AT1G77660 (E=6e-141) | MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related (415 aa)    
Predicted Functional Partners:
Bra018107
AT3G55580 (E=3e-058) | regulator of chromosome condensation (RCC1) family protein (254 aa)
     
  0.640
Bra022392
AT3G19180 (E=0.0) ARC6H, PARC6 | ARC6H (807 aa)
       
 
  0.597
Bra037267
AT2G17510 (E=0.0) EMB2763 | EMB2763 (EMBRYO DEFECTIVE 2763); RNA binding / ribonuclease (934 aa)
           
  0.483
Bra008326
AT1G77700 (E=7e-117) | pathogenesis-related thaumatin family protein (304 aa)
           
  0.449
Bra028046
AT1G34260 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1442 aa)
     
  0.435
Bra021545
AT3G14270 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1774 aa)
     
  0.435
Bra016167
AT1G71010 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1541 aa)
     
  0.435
Bra011429
AT4G33240 (E=0.0) | 1-phosphatidylinositol-4-phosphate 5-kinase/ ATP binding / phosphatidylinositol phosphate kinase/ protein binding / zinc ion binding (1719 aa)
     
  0.435
Bra007954
AT1G71010 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1539 aa)
     
  0.435
Bra001545
AT3G14270 (E=0.0) | phosphatidylinositol-4-phosphate 5-kinase family protein (1767 aa)
     
  0.435
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (15%) [HD]