STRINGSTRING
Bra008331 protein (Brassica rapa) - STRING interaction network
"Bra008331" - AT1G21980 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008331AT1G21980 (E=0.0) ATPIP5K1, ATPIPK1 | ATPIP5K1 (PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1); 1-phosphatidylinositol-4-phosphate 5-kinase/ actin filament binding / actin monomer binding / phosphatidylinositol phosphate kinase (741 aa)    
Predicted Functional Partners:
Bra018107
AT3G55580 (E=3e-058) | regulator of chromosome condensation (RCC1) family protein (254 aa)
     
  0.983
Bra031936
AT5G64070 (E=0.0) PI-4KBETA1, PI4KBETA1 | PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1); 1-phosphatidylinositol 4-kinase (1132 aa)
     
  0.978
Bra024264
AT5G64070 (E=0.0) PI-4KBETA1, PI4KBETA1 | PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1); 1-phosphatidylinositol 4-kinase (1117 aa)
     
  0.978
Bra029697
AT5G58690 (E=9e-168) ATPLC5, PLC5 | phosphoinositide-specific phospholipase C family protein (564 aa)
     
  0.977
Bra020359
AT5G58700 (E=9e-309) ATPLC4, PLC4 | phosphoinositide-specific phospholipase C family protein (594 aa)
     
  0.977
Bra004987
AT2G40116 (E=5e-283) | phosphoinositide-specific phospholipase C family protein (609 aa)
     
  0.977
Bra002625
AT5G58700 (E=8e-294) ATPLC4, PLC4 | phosphoinositide-specific phospholipase C family protein (589 aa)
     
  0.977
Bra000168
AT2G40116 (E=1e-261) | phosphoinositide-specific phospholipase C family protein (606 aa)
     
  0.977
Bra040049
AT3G08510 (E=1e-293) ATPLC2 | ATPLC2 (PHOSPHOLIPASE C 2); phospholipase C (542 aa)
     
  0.971
Bra039499
AT3G47290 (E=1e-019) ATPLC8, PLC8 | phosphoinositide-specific phospholipase C family protein (297 aa)
     
  0.971
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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