STRINGSTRING
Bra008370 protein (Brassica rapa) - STRING interaction network
"Bra008370" - AT1G78590 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008370AT1G78590 (E=8e-159) NADK3, ATNADK-3 | NADK3 (NAD(H) KINASE 3); NAD+ kinase/ NADH kinase (317 aa)    
Predicted Functional Partners:
Bra031248
AT3G21070 (E=1e-258) NADK1 | NADK1 (NAD KINASE 1); NAD+ kinase/ NADH kinase/ calmodulin binding (523 aa)
         
  0.749
Bra023907
AT3G21070 (E=7e-246) NADK1 | NADK1 (NAD KINASE 1); NAD+ kinase/ NADH kinase/ calmodulin binding (523 aa)
         
  0.749
Bra017934
AT1G21640 (E=5e-311) NADK2, ATNADK2 | NADK2; NAD+ kinase/ calmodulin binding (970 aa)
         
  0.749
Bra001810
AT3G21070 (E=3e-251) NADK1 | NADK1 (NAD KINASE 1); NAD+ kinase/ NADH kinase/ calmodulin binding (542 aa)
         
  0.749
Bra035101
AT1G79230 (E=3e-187) ST1, ATMST1, MST1, ATRDH1, STR1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (375 aa)
       
      0.612
Bra026055
AT1G79230 (E=2e-164) ST1, ATMST1, MST1, ATRDH1, STR1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (380 aa)
       
      0.612
Bra008403
AT1G79230 (E=2e-017) ST1, ATMST1, MST1, ATRDH1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (179 aa)
       
      0.612
Bra003617
AT1G79230 (E=1e-189) ST1, ATMST1, MST1, ATRDH1, STR1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (379 aa)
       
      0.612
Bra028959
AT5G55810 (E=1e-114) AtNMNAT | AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase); nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase (238 aa)
         
  0.553
Bra002874
AT5G55810 (E=2e-098) AtNMNAT | AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase); nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase (203 aa)
         
  0.553
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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