STRINGSTRING
Bra008377 protein (Brassica rapa) - STRING interaction network
"Bra008377" - AT1G78690 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008377AT1G78690 (E=6e-141) | phospholipid/glycerol acyltransferase family protein (285 aa)    
Predicted Functional Partners:
Bra022365
AT3G18850 (E=8e-182) LPAT5 | LPAT5; acyltransferase (346 aa)
         
  0.933
Bra008174
AT1G75020 (E=6e-172) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (382 aa)
         
  0.933
Bra003775
AT1G75020 (E=3e-171) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (380 aa)
         
  0.933
Bra001150
AT3G05510 (E=3e-157) | phospholipid/glycerol acyltransferase family protein (432 aa)
         
0.908
Bra029521
AT4G04870 (E=2e-107) CLS | CLS (CARDIOLIPIN SYNTHASE); cardiolipin synthase/ phosphatidyltransferase (330 aa)
         
  0.900
Bra007344
AT3G57650 (E=9e-216) LPAT2 | LPAT2; 1-acylglycerol-3-phosphate O-acyltransferase (390 aa)
         
  0.700
Bra003292
AT3G57650 (E=2e-213) LPAT2 | LPAT2; 1-acylglycerol-3-phosphate O-acyltransferase (390 aa)
         
  0.700
Bra037553
AT3G18850 (E=1e-183) LPAT5 | LPAT5; acyltransferase (355 aa)
         
  0.699
Bra034650
AT3G18850 (E=2e-038) LPAT5 | LPAT5; acyltransferase (93 aa)
         
  0.699
Bra030448
AT1G51260 (E=3e-178) LPAT3 | LPAT3; 1-acylglycerol-3-phosphate O-acyltransferase (376 aa)
         
  0.699
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (19%) [HD]