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Bra008385 protein (Brassica rapa) - STRING interaction network
"Bra008385" - AT1G78900 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra008385AT1G78900 (E=9e-256) VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism (588 aa)    
Predicted Functional Partners:
Bra005634
AT4G38510 (E=6e-014) | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative (152 aa)
 
  0.996
Bra007415
AT3G58730 (E=7e-136) | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) (261 aa)
 
  0.993
Bra003352
AT3G58730 (E=9e-136) | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) (261 aa)
 
  0.993
Bra015797
AT1G76030 (E=2e-278) | vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit (488 aa)
 
0.992
Bra012223
AT1G20260 (E=4e-257) | hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism (471 aa)
 
0.992
Bra025804
AT1G76030 (E=2e-157) | vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit (404 aa)
 
0.992
Bra026227
AT1G30580 (E=2e-186) | GTP binding ; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (644 aa)
     
  0.991
Bra014555
AT3G58730 (E=3e-050) | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) (202 aa)
 
  0.991
Bra034613
AT3G42050 (E=2e-088) | vacuolar ATP synthase subunit H family protein (434 aa)
     
  0.989
Bra017632
AT3G42050 (E=1e-074) | vacuolar ATP synthase subunit H family protein (472 aa)
     
  0.989
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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