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Bra008427 protein (Brassica rapa) - STRING interaction network
"Bra008427" - AT1G79620 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008427AT1G79620 (E=2e-194) | leucine-rich repeat transmembrane protein kinase, putative (1465 aa)    
Predicted Functional Partners:
Bra025951
AT1G17750 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1785 aa)
   
0.996
Bra022032
AT5G46330 (E=2e-306) FLS2 | FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor protein serine/threonine kinase (1107 aa)
   
0.996
Bra017563
AT5G46330 (E=0.0) FLS2 | FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor protein serine/threonine kinase (1235 aa)
   
0.996
Bra021474
AT3G02130 (E=0.0) RPK2, TOAD2 | RPK2 (RECEPTOR-LIKE PROTEIN KINASE 2); ATP binding / kinase/ protein serine/threonine kinase (1554 aa)
   
0.996
Bra015829
AT1G75640 (E=0.0) | leucine-rich repeat family protein / protein kinase family protein (1138 aa)
   
0.996
Bra015204
AT3G47570 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1008 aa)
   
0.996
Bra005562
AT3G47570 (E=6e-309) | leucine-rich repeat transmembrane protein kinase, putative (1026 aa)
   
0.996
Bra006560
AT5G20480 (E=0.0) EFR | EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase (1032 aa)
   
0.996
Bra002305
AT5G20480 (E=0.0) EFR | EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase (1031 aa)
   
0.996
Bra027938
AT3G47570 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (979 aa)
   
0.996
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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