STRINGSTRING
Bra008431 protein (Brassica rapa) - STRING interaction network
"Bra008431" - AT1G80900 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008431AT1G80900 (E=2e-166) ATMGT1, MGT1 | magnesium transporter CorA-like family protein (MGT1) (MRS2) (371 aa)    
Predicted Functional Partners:
Bra030669
AT1G07050 (E=2e-063) | CONSTANS-like protein-related (383 aa)
       
 
  0.483
Bra021617
AT2G30160 (E=8e-157) | mitochondrial substrate carrier family protein (326 aa)
       
 
  0.455
Bra018332
AT2G30160 (E=3e-143) | mitochondrial substrate carrier family protein (333 aa)
       
 
  0.455
Bra015545
AT1G07030 (E=1e-159) | mitochondrial substrate carrier family protein (328 aa)
       
 
  0.455
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (10%) [HD]