STRINGSTRING
Bra008434 protein (Brassica rapa) - STRING interaction network
"Bra008434" - AT1G80860 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008434AT1G80860 (E=3e-089) ATPLMT, PLMT | PLMT (PHOSPHOLIPID N-METHYLTRANSFERASE); phosphatidyl-N-dimethylethanolamine N-methyltransferase/ phosphatidyl-N-methylethanolamine N-methyltransferase (164 aa)    
Predicted Functional Partners:
Bra021355
AT3G03530 (E=8e-285) NPC4 | NPC4 (NONSPECIFIC PHOSPHOLIPASE C4); hydrolase, acting on ester bonds / phospholipase C (541 aa)
         
  0.896
Bra009491
AT5G04040 (E=0.0) SDP1 | SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase (1425 aa)
         
  0.896
Bra018740
AT1G48600 (E=1e-259) | phosphoethanolamine N-methyltransferase 2, putative (NMT2) (473 aa)
           
  0.547
Bra022266
AT3G18000 (E=2e-266) NMT1, XPL1, PEAMT | XPL1 (XIPOTL 1); methyltransferase/ phosphoethanolamine N-methyltransferase (506 aa)
           
  0.543
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (6%) [HD]