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Bra008551 protein (Brassica rapa) - STRING interaction network
"Bra008551" - AT1G01050 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008551AT1G01050 (E=8e-113) AtPPa1 | AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase (214 aa)    
Predicted Functional Partners:
Bra011352
AT2G25610 (E=2e-075) | H+-transporting two-sector ATPase, C subunit family protein (177 aa)
     
  0.936
Bra022912
AT3G11380 (E=8e-041) | pentatricopeptide (PPR) repeat-containing protein (879 aa)
     
 
  0.936
Bra022908
AT2G33040 (E=2e-172) | ATP synthase gamma chain, mitochondrial (ATPC) (325 aa)
     
 
  0.918
Bra021826
AT2G33040 (E=1e-167) | ATP synthase gamma chain, mitochondrial (ATPC) (321 aa)
     
 
  0.918
Bra005531
AT2G33040 (E=2e-162) | ATP synthase gamma chain, mitochondrial (ATPC) (325 aa)
     
 
  0.918
Bra028649
AT5G08680 (E=6e-268) | ATP synthase beta chain, mitochondrial, putative ; Produces ATP from ADP in the presence of a proton gradient across the membrane (564 aa)
     
 
  0.915
Bra028648
AT5G08680 (E=7e-263) | ATP synthase beta chain, mitochondrial, putative ; Produces ATP from ADP in the presence of a proton gradient across the membrane (555 aa)
     
 
  0.915
Bra009363
AT5G08670 (E=7e-276) | ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism ; Produces ATP from ADP in the presence of a proton gradient across the membrane (555 aa)
     
 
  0.915
Bra006013
AT5G08690 (E=1e-281) | ATP synthase beta chain 2, mitochondrial ; Produces ATP from ADP in the presence of a proton gradient across the membrane (554 aa)
     
 
  0.915
Bra029511
AT4G04640 (E=2e-165) ATPC1 | ATPC1; enzyme regulator (375 aa)
     
 
  0.913
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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