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Bra008559 protein (Brassica rapa) - STRING interaction network
"Bra008559" - AT4G02150 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008559AT4G02150 (E=3e-239) MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIER OF SNC1, 6); binding / protein transporter (531 aa)    
Predicted Functional Partners:
Bra029733
AT3G08943 (E=0.0) | binding / protein transporter (872 aa)
     
  0.977
Bra003054
AT5G53480 (E=0.0) | importin beta-2, putative (868 aa)
     
  0.977
Bra038335
AT2G46520 (E=5e-014) | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative (182 aa)
     
 
  0.946
Bra035645
AT2G46520 (E=5e-287) | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative (792 aa)
     
 
  0.946
Bra004531
AT2G46520 (E=0.0) | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative (971 aa)
     
 
  0.946
Bra020065
AT5G19820 (E=0.0) emb2734 | emb2734 (embryo defective 2734); binding / lyase (1079 aa)
     
 
  0.944
Bra006519
AT5G19820 (E=0.0) emb2734 | emb2734 (embryo defective 2734); binding / lyase (1115 aa)
     
 
  0.944
Bra002263
AT5G19820 (E=0.0) emb2734 | emb2734 (embryo defective 2734); binding / lyase (1111 aa)
     
 
  0.944
Bra026329
AT4G27640 (E=0.0) | importin beta-2 subunit family protein (1049 aa)
     
 
  0.944
Bra019039
AT4G27640 (E=0.0) | importin beta-2 subunit family protein (1049 aa)
     
 
  0.944
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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