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Bra008570 protein (Brassica rapa) - STRING interaction network
"Bra008570" - AT5G17220 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008570AT5G17220 (E=4e-094) ATGSTF12, GST26, TT19 | ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12); glutathione transferase (213 aa)    
Predicted Functional Partners:
Bra032367
AT1G30230 (E=1e-080) | elongation factor 1-beta / EF-1-beta (230 aa)
     
  0.948
Bra032366
AT1G30230 (E=2e-092) | elongation factor 1-beta / EF-1-beta (252 aa)
     
  0.948
Bra020043
AT5G19510 (E=9e-084) | elongation factor 1B alpha-subunit 2 (eEF1Balpha2) (225 aa)
     
  0.948
Bra017029
AT1G30230 (E=1e-031) | elongation factor 1-beta / EF-1-beta (205 aa)
     
  0.948
Bra010787
AT1G30230 (E=3e-091) | elongation factor 1-beta / EF-1-beta (234 aa)
     
  0.948
Bra008915
AT5G12110 (E=2e-085) | elongation factor 1B alpha-subunit 1 (eEF1Balpha1) (227 aa)
     
  0.948
Bra006507
AT5G19510 (E=2e-082) | elongation factor 1B alpha-subunit 2 (eEF1Balpha2) (256 aa)
     
  0.948
Bra004986
AT1G30230 (E=2e-053) | elongation factor 1-beta / EF-1-beta (405 aa)
     
  0.948
Bra002241
AT5G19510 (E=5e-086) | elongation factor 1B alpha-subunit 2 (eEF1Balpha2) (223 aa)
     
  0.948
Bra040811
AT4G13780 (E=0.0) | methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (802 aa)
     
  0.947
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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