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Bra008594 protein (Brassica rapa) - STRING interaction network
"Bra008594" - AT5G16800 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra008594AT5G16800 (E=5e-128) | GCN5-related N-acetyltransferase (GNAT) family protein (257 aa)    
Predicted Functional Partners:
Bra016559
AT1G18335 (E=2e-097) | GCN5-related N-acetyltransferase (GNAT) family protein (251 aa)
           
  0.483
Bra033377
AT1G03150 (E=1e-098) | GCN5-related N-acetyltransferase (GNAT) family protein (283 aa)
           
  0.483
Bra030521
AT1G03150 (E=2e-063) | GCN5-related N-acetyltransferase (GNAT) family protein (117 aa)
           
  0.483
Bra032548
AT1G03650 (E=2e-077) | GCN5-related N-acetyltransferase (GNAT) family protein (158 aa)
           
  0.455
Bra005135
AT2G38130 (E=7e-096) ATMAK3 | ATMAK3; N-acetyltransferase (185 aa)
           
  0.455
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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