STRINGSTRING
Bra008597 protein (Brassica rapa) - STRING interaction network
"Bra008597" - AT5G16760 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008597AT5G16760 (E=6e-158) | inositol 1,3,4-trisphosphate 5/6-kinase (409 aa)    
Predicted Functional Partners:
Bra027458
AT5G42810 (E=3e-198) ATIPK1 | ATIPK1 (Inositol-pentakisphosphate 2-kinase 1); inositol pentakisphosphate 2-kinase/ inositol tetrakisphosphate 2-kinase (443 aa)
         
  0.945
Bra016388
AT1G59312 (E=1e-169) | ATP binding / inositol pentakisphosphate 2-kinase (583 aa)
         
  0.943
Bra035915
AT5G61760 (E=1e-130) ATIPK2BETA, IPK2B, IPK2BETA | ATIPK2BETA; inositol or phosphatidylinositol kinase/ inositol trisphosphate 6-kinase (274 aa)
         
  0.935
Bra004796
AT2G43980 (E=9e-243) AtITPK4 | AtITPK4 (inositol 1,3,4-trisphosphate 5/6-kinase 4); ATP binding / catalytic/ inositol tetrakisphosphate 1-kinase/ inositol-1,3,4-trisphosphate 5/6-kinase/ magnesium ion binding (488 aa)
         
0.799
Bra015615
AT1G47510 (E=6e-146) AT5PTASE11, 5PTASE11 | 5PTASE11 (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 11); hydrolase/ phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase/ phosphatidylinositol-3,5-bisphosphate 5-phosphatase/ phosphatidylinositol-4,5-bisphosphate 5-phosphatase (329 aa)
         
  0.681
Bra034444
AT1G34120 (E=2e-153) IP5PI, AT5P1, ATIP5PI, AT5PTASE1 | IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I); inositol trisphosphate phosphatase/ inositol-polyphosphate 5-phosphatase (545 aa)
         
  0.546
Bra032461
AT1G05577 (E=4e-086) | unknown protein (538 aa)
         
  0.546
Bra032456
AT1G05630 (E=0.0) AT5PTASE13, 5PTASE13 | 5PTASE13; inositol or phosphatidylinositol phosphatase (1121 aa)
         
  0.546
Bra031881
AT5G65090 (E=2e-196) MRH3, BST1, DER4 | BST1 (BRISTLED 1); hydrolase/ inositol or phosphatidylinositol phosphatase (465 aa)
         
  0.546
Bra030617
AT1G05630 (E=0.0) AT5PTASE13, 5PTASE13 | 5PTASE13; inositol or phosphatidylinositol phosphatase (1138 aa)
         
  0.546
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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