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Bra008635 protein (Brassica rapa) - STRING interaction network
"Bra008635" - AT5G16210 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008635AT5G16210 (E=3e-081) | HEAT repeat-containing protein (325 aa)    
Predicted Functional Partners:
Bra031003
AT1G17720 (E=7e-262) ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator (495 aa)
     
  0.978
Bra030425
AT1G51690 (E=7e-158) ATB ALPHA | ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator (494 aa)
     
  0.978
Bra025952
AT1G17720 (E=3e-262) ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator (506 aa)
     
  0.978
Bra018924
AT1G51690 (E=3e-152) ATB ALPHA | ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator (485 aa)
     
  0.978
Bra016590
AT1G17720 (E=6e-252) ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator (479 aa)
     
  0.978
Bra014296
AT1G51690 (E=1e-146) ATB ALPHA | ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator (428 aa)
     
  0.978
Bra031712
AT1G10430 (E=8e-172) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (306 aa)
     
  0.976
Bra027833
AT1G59830 (E=9e-181) PP2A-1 | PP2A-1; protein serine/threonine phosphatase (306 aa)
     
  0.976
Bra019934
AT1G10430 (E=2e-180) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (306 aa)
     
  0.976
Bra017398
AT1G10430 (E=2e-038) PP2A-2 | PP2A-2; protein serine/threonine phosphatase (132 aa)
     
  0.976
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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