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Bra008677 protein (Brassica rapa) - STRING interaction network
"Bra008677" - AT5G15770 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008677AT5G15770 (E=2e-069) AtGNA1 | AtGNA1 (Arabidopsis thaliana glucose-6-phosphate acetyltransferase 1); N-acetyltransferase/ glucosamine 6-phosphate N-acetyltransferase (160 aa)    
Predicted Functional Partners:
Bra002129
AT5G18070 (E=1e-239) DRT101 | DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101); intramolecular transferase, phosphotransferases / magnesium ion binding (545 aa)
   
 
  0.953
Bra015012
AT3G24090 (E=1e-247) | glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminase (673 aa)
     
  0.943
Bra001926
AT3G24090 (E=2e-248) | glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminase (680 aa)
     
  0.943
Bra039025
AT4G29130 (E=3e-241) ATHXK1, GIN2, HXK1 | HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase (500 aa)
         
  0.900
Bra036699
AT4G29130 (E=2e-237) ATHXK1, GIN2, HXK1 | HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase (499 aa)
         
  0.900
Bra030490
AT1G50460 (E=1e-228) HKL1 | HKL1 (HEXOKINASE-LIKE 1); ATP binding / fructokinase/ glucokinase/ hexokinase (498 aa)
         
  0.900
Bra018850
AT1G50460 (E=2e-210) HKL1 | HKL1 (HEXOKINASE-LIKE 1); ATP binding / fructokinase/ glucokinase/ hexokinase (498 aa)
         
  0.900
Bra015599
AT1G47840 (E=1e-236) HXK3 | HXK3 (HEXOKINASE 3); ATP binding / fructokinase/ glucokinase/ hexokinase (497 aa)
         
  0.900
Bra014254
AT1G50460 (E=2e-221) HKL1 | HKL1 (HEXOKINASE-LIKE 1); ATP binding / fructokinase/ glucokinase/ hexokinase (499 aa)
         
  0.900
Bra035184
AT1G80410 (E=0.0) EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding (897 aa)
       
      0.886
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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