STRINGSTRING
Bra008695 protein (Brassica rapa) - STRING interaction network
"Bra008695" - AT5G15490 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008695AT5G15490 (E=1e-275) | UDP-glucose 6-dehydrogenase, putative (480 aa)    
Predicted Functional Partners:
Bra039799
AT3G53520 (E=8e-229) UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); UDP-glucuronate decarboxylase/ catalytic (427 aa)
   
 
  0.965
Bra035672
AT2G28760 (E=4e-192) UXS6 | NAD-dependent epimerase/dehydratase family protein (342 aa)
   
 
  0.965
Bra034374
AT2G27860 (E=5e-225) AXS1 | AXS1 (UDP-D-apiose/UDP-D-xylose synthase 1); NAD or NADH binding / UDP-glucuronate decarboxylase (389 aa)
   
 
  0.965
Bra030716
AT1G08200 (E=1e-222) AXS2 | AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2); UDP-glucuronate decarboxylase (390 aa)
   
 
  0.965
Bra018643
AT1G08200 (E=3e-221) AXS2 | AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2); UDP-glucuronate decarboxylase (389 aa)
   
 
  0.965
Bra014390
AT3G62830 (E=1e-232) UXS2, ATUXS2, AUD1 | AUD1; UDP-glucuronate decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase (437 aa)
   
 
  0.965
Bra011928
AT2G28760 (E=1e-193) UXS6 | NAD-dependent epimerase/dehydratase family protein (339 aa)
   
 
  0.965
Bra003511
AT3G62830 (E=7e-234) UXS2, ATUXS2, AUD1 | AUD1; UDP-glucuronate decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase (433 aa)
   
 
  0.965
Bra000457
AT2G47650 (E=2e-220) UXS4 | UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-glucuronate decarboxylase/ catalytic (438 aa)
   
 
  0.965
Bra020621
AT5G28840 (E=2e-216) GME | GME (GDP-D-MANNOSE 3’,5’-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD or NADH binding / catalytic (379 aa)
   
 
  0.964
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (12%) [HD]