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Bra008723 protein (Brassica rapa) - STRING interaction network
"Bra008723" - AT5G15090 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008723AT5G15090 (E=7e-124) VDAC3, ATVDAC3 | VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel (276 aa)    
Predicted Functional Partners:
Bra018503
AT4G04640 (E=2e-150) ATPC1 | ATPC1; enzyme regulator (504 aa)
     
  0.823
Bra038249
AT3G20000 (E=5e-152) TOM40 | TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel (310 aa)
     
  0.819
Bra035826
AT3G20000 (E=8e-151) TOM40 | TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel (309 aa)
     
  0.819
Bra018846
AT1G50400 (E=5e-052) | porin family protein (320 aa)
     
  0.819
Bra038340
AT1G68890 (E=0.0) | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding (1710 aa)
         
  0.797
Bra039086
AT3G27280 (E=9e-132) ATPHB4 | ATPHB4 (PROHIBITIN 4) (278 aa)
     
 
  0.766
Bra028475
AT5G40770 (E=2e-136) ATPHB3 | ATPHB3 (PROHIBITIN 3) (277 aa)
     
 
  0.766
Bra025548
AT5G40770 (E=6e-138) ATPHB3 | ATPHB3 (PROHIBITIN 3) (277 aa)
     
 
  0.766
Bra025263
AT3G27280 (E=3e-131) ATPHB4 | ATPHB4 (PROHIBITIN 4) (278 aa)
     
 
  0.766
Bra030522
AT1G03160 (E=0.0) FZL | FZL (FZO-LIKE); GTP binding / GTPase/ thiamin-phosphate diphosphorylase (909 aa)
         
  0.697
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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