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Bra008726 protein (Brassica rapa) - STRING interaction network
"Bra008726" - AT5G15070 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008726AT5G15070 (E=0.0) | acid phosphatase/ oxidoreductase/ transition metal ion binding (1581 aa)    
Predicted Functional Partners:
Bra000209
AT2G40860 (E=0.0) | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (655 aa)
     
0.932
Bra027458
AT5G42810 (E=3e-198) ATIPK1 | ATIPK1 (Inositol-pentakisphosphate 2-kinase 1); inositol pentakisphosphate 2-kinase/ inositol tetrakisphosphate 2-kinase (443 aa)
         
  0.902
Bra016388
AT1G59312 (E=1e-169) | ATP binding / inositol pentakisphosphate 2-kinase (583 aa)
         
  0.902
Bra010439
AT1G64280 (E=5e-190) NPR1, SAI1, NIM1, ATNPR1 | NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activator (962 aa)
     
  0.869
Bra039273
AT2G46580 (E=3e-100) | pyridoxine 5’-phosphate oxidase-related (198 aa)
       
      0.861
Bra025314
AT5G61760 (E=5e-127) ATIPK2BETA, IPK2B, IPK2BETA | ATIPK2BETA; inositol or phosphatidylinositol kinase/ inositol trisphosphate 6-kinase (281 aa)
         
  0.715
Bra014626
AT2G48020 (E=6e-036) | sugar transporter, putative (141 aa)
       
  0.681
Bra040123
AT3G04710 (E=3e-205) | ankyrin repeat family protein (594 aa)
     
  0.678
Bra001120
AT3G04710 (E=2e-210) | ankyrin repeat family protein (456 aa)
     
  0.678
Bra015052
AT3G24530 (E=2e-260) | AAA-type ATPase family protein / ankyrin repeat family protein (482 aa)
     
  0.675
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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