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Bra008739 protein (Brassica rapa) - STRING interaction network
"Bra008739" - AT5G14760 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008739AT5G14760 (E=0.0) AO | AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (649 aa)    
Predicted Functional Partners:
Bra037933
AT5G50210 (E=4e-315) QS, OLD5, SUFE3 | QS (QUINOLINATE SYNTHASE); 4 iron, 4 sulfur cluster binding / enzyme activator/ protein homodimerization/ quinolinate synthetase A (734 aa)
   
  0.996
Bra026671
AT2G01350 (E=9e-165) QPT | QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide diphosphorylase (carboxylating) (353 aa)
     
  0.971
Bra036142
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (729 aa)
         
  0.955
Bra023169
AT1G31230 (E=0.0) AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase (909 aa)
         
  0.943
Bra013425
AT4G19710 (E=0.0) AK-HSDH II, AK-HSDH | bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative (923 aa)
         
  0.943
Bra020639
AT5G49460 (E=0.0) ACLB-2 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase (608 aa)
         
  0.926
Bra006138
AT5G12040 (E=1e-168) | carbon-nitrogen hydrolase family protein (364 aa)
       
  0.911
Bra002510
AT5G60120 (E=5e-161) TOE2 | TOE2; DNA binding / transcription factor (452 aa)
       
      0.906
Bra028843
AT5G03290 (E=2e-187) | isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative (595 aa)
       
  0.905
Bra019206
AT4G24830 (E=2e-151) | arginosuccinate synthase family (517 aa)
         
  0.904
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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