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Bra008776 protein (Brassica rapa) - STRING interaction network
"Bra008776" - AT5G14120 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra008776AT5G14120 (E=3e-269) | nodulin family protein (580 aa)    
Predicted Functional Partners:
Bra033278
AT1G01190 (E=3e-281) CYP78A8 | CYP78A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (535 aa)
           
  0.540
Bra032624
AT1G01190 (E=1e-271) CYP78A8 | CYP78A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (534 aa)
           
  0.540
Bra024568
AT1G23190 (E=0.0) | phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative (583 aa)
           
  0.445
Bra024177
AT4G28910 (E=1e-120) | LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1675 (InterPro-IPR012463); BEST Arabidopsis thaliana protein match is- nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR-AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species- Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source- NCBI BLink). (394 aa)
           
  0.445
Bra016357
AT1G23190 (E=0.0) | phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative (583 aa)
           
  0.445
Bra011069
AT4G28910 (E=2e-164) | LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1675 (InterPro-IPR012463); BEST Arabidopsis thaliana protein match is- nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR-AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species- Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source- NCBI BLink). (426 aa)
           
  0.445
Bra035974
AT5G43320 (E=8e-249) ckl8 | ckl8 (Casein Kinase I-like 8); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (475 aa)
           
  0.443
Bra033169
AT4G24100 (E=2e-252) | protein kinase family protein (659 aa)
           
  0.443
Bra027528
AT5G44100 (E=2e-215) ckl7 | ckl7 (Casein Kinase I-like 7); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (478 aa)
           
  0.443
Bra023732
AT3G23340 (E=3e-217) ckl10 | ckl10 (Casein Kinase I-like 10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (433 aa)
           
  0.443
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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