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Bra008801 protein (Brassica rapa) - STRING interaction network
"Bra008801" - AT5G13810 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008801AT5G13810 (E=5e-119) | glutaredoxin family protein (267 aa)    
Predicted Functional Partners:
Bra024548
AT1G22920 (E=3e-180) CSN5A, JAB1, AJH1 | CSN5A (COP9 SIGNALOSOME 5A) (356 aa)
       
      0.489
Bra019509
AT3G47640 (E=3e-090) | basic helix-loop-helix (bHLH) family protein (234 aa)
       
      0.489
Bra008954
AT5G11550 (E=2e-090) | binding (304 aa)
       
      0.489
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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