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Bra008812 protein (Brassica rapa) - STRING interaction network
"Bra008812" - AT5G13640 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008812AT5G13640 (E=0.0) ATPDAT, PDAT | ATPDAT; phosphatidylcholine-sterol O-acyltransferase (666 aa)    
Predicted Functional Partners:
Bra038905
AT3G51520 (E=8e-135) | diacylglycerol acyltransferase family (318 aa)
       
  0.969
Bra029774
AT3G09560 (E=1e-242) | lipin family protein (813 aa)
       
  0.947
Bra027461
AT5G42870 (E=6e-230) | lipin family protein (823 aa)
       
  0.946
Bra009491
AT5G04040 (E=0.0) SDP1 | SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase (1425 aa)
     
 
  0.945
Bra034073
AT3G09560 (E=5e-232) | lipin family protein (857 aa)
       
  0.945
Bra033646
AT5G42870 (E=2e-210) | lipin family protein (837 aa)
       
  0.945
Bra023984
AT4G31780 (E=1e-261) MGD1, MGDA | MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1); 1,2-diacylglycerol 3-beta-galactosyltransferase/ UDP-galactosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups (532 aa)
         
  0.897
Bra011297
AT4G31780 (E=8e-253) MGD1, MGDA | MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1); 1,2-diacylglycerol 3-beta-galactosyltransferase/ UDP-galactosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups (527 aa)
         
  0.896
Bra012851
AT3G51520 (E=2e-128) | diacylglycerol acyltransferase family (317 aa)
       
  0.848
Bra028805
AT5G04040 (E=0.0) SDP1 | SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase (806 aa)
     
 
  0.788
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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