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Bra008876 protein (Brassica rapa) - STRING interaction network
"Bra008876" - AT5G12860 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra008876AT5G12860 (E=8e-164) DiT1 | DiT1 (dicarboxylate transporter 1); oxoglutarate-malate antiporter (297 aa)    
Predicted Functional Partners:
Bra039818
AT2G14750 (E=3e-140) APK, AKN1, ATAKN1 | APK (APS KINASE); ATP binding / adenylylsulfate kinase/ kinase/ transferase, transferring phosphorus-containing groups ; Catalyzes the synthesis of activated sulfate (273 aa)
              0.437
Bra037843
AT5G67520 (E=1e-016) | adenylylsulfate kinase, putative (113 aa)
              0.437
Bra037760
AT5G63980 (E=2e-154) SAL1, ALX8, ATSAL1, HOS2, FRY1 | SAL1; 3’(2’),5’-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase (358 aa)
              0.437
Bra034466
AT1G62180 (E=3e-219) APR2, APSR, PRH43, PRH, ATAPR2 | APR2 (5’ADENYLYLPHOSPHOSULFATE REDUCTASE 2); adenylyl-sulfate reductase/ phosphoadenylyl-sulfate reductase (thioredoxin) (479 aa)
              0.437
Bra031965
AT3G03900 (E=2e-109) | adenylylsulfate kinase, putative ; Catalyzes the synthesis of activated sulfate (203 aa)
              0.437
Bra031940
AT5G64000 (E=1e-154) SAL2, ATSAL2 | SAL2; 3’(2’),5’-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase (349 aa)
              0.437
Bra029552
AT4G05090 (E=2e-193) | inositol monophosphatase family protein (388 aa)
              0.437
Bra029505
AT4G04610 (E=1e-224) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase (457 aa)
              0.437
Bra028835
AT5G03430 (E=1e-250) | phosphoadenosine phosphosulfate (PAPS) reductase family protein (503 aa)
              0.437
Bra024443
AT5G67520 (E=4e-105) | adenylylsulfate kinase, putative ; Catalyzes the synthesis of activated sulfate (277 aa)
              0.437
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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